Scientific Data (May 2024)

Chromosome-level genome assembly and annotation of the cold-water species Ophiura sarsii

  • Chen Han,
  • Qian Zhang,
  • Yixuan Li,
  • Yuyao Sun,
  • Yue Dong,
  • Meiling Ge,
  • Zhong Li,
  • Xuying Hu,
  • Bing Liu,
  • Xuelei Zhang,
  • Zongling Wang,
  • Qinzeng Xu

DOI
https://doi.org/10.1038/s41597-024-03412-y
Journal volume & issue
Vol. 11, no. 1
pp. 1 – 9

Abstract

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Abstract The cold-water species Ophiura sarsii, a brittle star, is a key echinoderm in the Arctic continental shelf region, highly sensitive to climate change. However, the absence of a high-quality genome has hindered a thorough understanding of its adaptive evolution. In this study, we reported the first chromosome-level genome assembly of O. sarsii. The genome assembly totalled 1.57 Gb, encompassing 19 chromosomes with a GC content of 37.11% and a scaffold N50 length of 78.03 Mb. The Benchmarking Universal Single-Copy Orthologs (BUSCO) assessment yielded a completeness estimate of 93.5% for this assembly. We predicted a total of 27,099 protein-coding genes, with 25,079 functionally annotated. The genome was comprised of 58.09% transposable elements. This chromosome-level genome of O. sarsii contributes to our understanding of the origin and evolution of marine organisms.