Bio-Protocol (Apr 2022)

An Optimized Tat/Rev Induced Limiting Dilution Assay for the Characterization of HIV-1 Latent Reservoirs

  • Swarnima Mishra,
  • Yuvrajsinh Gohil,
  • KAVITA MEHTA,
  • Anish D'silva,
  • Afzal Amanullah,
  • Deepak Selvam,
  • Neelam Pargain,
  • Narendra Nala,
  • G. Sanjeeva,
  • Udaykumar Ranga

DOI
https://doi.org/10.21769/BioProtoc.4391
Journal volume & issue
Vol. 12, no. 8

Abstract

Read online

The administration of antiretroviral therapy (ART) leads to a rapid reduction in plasma viral load in HIV-1 seropositive subjects. However, when ART is suspended, the virus rebounds due to the presence of a latent viral reservoir. Several techniques have been developed to characterize this latent viral reservoir. Of the various assay formats available presently, the Tat/Rev induced limiting dilution assay (TILDA) offers the most robust and technically simple assay strategy. The TILDA formats reported thus far are limited by being selective to one or a few HIV-1 genetic subtypes, thus, restricting them from a broader level application. The novel TILDA, labelled as U-TILDA ('U' for universal), can detect all the major genetic subtypes of HIV-1 unbiasedly, and with comparable sensitivity of detection. U-TILDA is well suited to characterize the latent reservoirs of HIV-1 and aid in the formulation of cure strategies.Graphical abstract: