Nanoribbon-Based Electronic Detection of a Glioma-Associated Circular miRNA
Yuri D. Ivanov,
Kristina A. Malsagova,
Vladimir P. Popov,
Tatyana O. Pleshakova,
Andrey F. Kozlov,
Rafael A. Galiullin,
Ivan D. Shumov,
Svetlana I. Kapustina,
Fedor V. Tikhonenko,
Vadim S. Ziborov,
Alexander Yu. Dolgoborodov,
Oleg F. Petrov,
Olga A. Gadzhieva,
Boris A. Bashiryan,
Vadim N. Shimansky,
Natalia V. Potoldykova,
Dmitry V. Enikeev,
Dmitry Yu. Usachev,
Alexander I. Archakov
Affiliations
Yuri D. Ivanov
Laboratory of Nanobiotechnology, Institute of Biomedical Chemistry, 119121 Moscow, Russia
Kristina A. Malsagova
Laboratory of Nanobiotechnology, Institute of Biomedical Chemistry, 119121 Moscow, Russia
Vladimir P. Popov
Rzhanov Institute of Semiconductor Physics, Siberian Branch of Russian Academy of Sciences, 630090 Novosibirsk, Russia
Tatyana O. Pleshakova
Laboratory of Nanobiotechnology, Institute of Biomedical Chemistry, 119121 Moscow, Russia
Andrey F. Kozlov
Laboratory of Nanobiotechnology, Institute of Biomedical Chemistry, 119121 Moscow, Russia
Rafael A. Galiullin
Laboratory of Nanobiotechnology, Institute of Biomedical Chemistry, 119121 Moscow, Russia
Ivan D. Shumov
Laboratory of Nanobiotechnology, Institute of Biomedical Chemistry, 119121 Moscow, Russia
Svetlana I. Kapustina
Laboratory of Nanobiotechnology, Institute of Biomedical Chemistry, 119121 Moscow, Russia
Fedor V. Tikhonenko
Rzhanov Institute of Semiconductor Physics, Siberian Branch of Russian Academy of Sciences, 630090 Novosibirsk, Russia
Vadim S. Ziborov
Laboratory of Nanobiotechnology, Institute of Biomedical Chemistry, 119121 Moscow, Russia
Alexander Yu. Dolgoborodov
Joint Institute for High Temperatures of Russian Academy of Sciences, 125412 Moscow, Russia
Oleg F. Petrov
Joint Institute for High Temperatures of Russian Academy of Sciences, 125412 Moscow, Russia
Olga A. Gadzhieva
Federal State Autonomous Institution “N. N. Burdenko National Medical Research Center of Neurosurgery” of the Ministry of Health of the Russian Federation, 125047 Moscow, Russia
Boris A. Bashiryan
Federal State Autonomous Institution “N. N. Burdenko National Medical Research Center of Neurosurgery” of the Ministry of Health of the Russian Federation, 125047 Moscow, Russia
Vadim N. Shimansky
Federal State Autonomous Institution “N. N. Burdenko National Medical Research Center of Neurosurgery” of the Ministry of Health of the Russian Federation, 125047 Moscow, Russia
Natalia V. Potoldykova
Institute of Urology and Reproductive Health, Sechenov University, 119992 Moscow, Russia
Dmitry V. Enikeev
Institute of Urology and Reproductive Health, Sechenov University, 119992 Moscow, Russia
Dmitry Yu. Usachev
Federal State Autonomous Institution “N. N. Burdenko National Medical Research Center of Neurosurgery” of the Ministry of Health of the Russian Federation, 125047 Moscow, Russia
Alexander I. Archakov
Laboratory of Nanobiotechnology, Institute of Biomedical Chemistry, 119121 Moscow, Russia
Nanoribbon chips, based on “silicon-on-insulator” structures (SOI-NR chips), have been fabricated. These SOI-NR chips, whose surface was sensitized with covalently immobilized oligonucleotide molecular probes (oDNA probes), have been employed for the nanoribbon biosensor-based detection of a circular ribonucleic acid (circRNA) molecular marker of glioma in humans. The nucleotide sequence of the oDNA probes was complimentary to the sequence of the target oDNA. The latter represents a synthetic analogue of a glioma marker—NFIX circular RNA. In this way, the detection of target oDNA molecules in a pure buffer has been performed. The lowest concentration of the target biomolecules, detectable in our experiments, was of the order of ~10−17 M. The SOI-NR sensor chips proposed herein have allowed us to reveal an elevated level of the NFIX circular RNA in the blood of a glioma patient.