PLoS ONE (Jan 2015)

Cyanobacterial KnowledgeBase (CKB), a Compendium of Cyanobacterial Genomes and Proteomes.

  • Arul Prakasam Peter,
  • Karthick Lakshmanan,
  • Shylajanaciyar Mohandass,
  • Sangeetha Varadharaj,
  • Sivasudha Thilagar,
  • Kaleel Ahamed Abdul Kareem,
  • Prabaharan Dharmar,
  • Subramanian Gopalakrishnan,
  • Uma Lakshmanan

DOI
https://doi.org/10.1371/journal.pone.0136262
Journal volume & issue
Vol. 10, no. 8
p. e0136262

Abstract

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Cyanobacterial KnowledgeBase (CKB) is a free access database that contains the genomic and proteomic information of 74 fully sequenced cyanobacterial genomes belonging to seven orders. The database also contains tools for sequence analysis. The Species report and the gene report provide details about each species and gene (including sequence features and gene ontology annotations) respectively. The database also includes cyanoBLAST, an advanced tool that facilitates comparative analysis, among cyanobacterial genomes and genomes of E. coli (prokaryote) and Arabidopsis (eukaryote). The database is developed and maintained by the Sub-Distributed Informatics Centre (sponsored by the Department of Biotechnology, Govt. of India) of the National Facility for Marine Cyanobacteria, a facility dedicated to marine cyanobacterial research. CKB is freely available at http://nfmc.res.in/ckb/index.html.