IUCrJ
(May 2016)
Protein structure determination by single-wavelength anomalous diffraction phasing of X-ray free-electron laser data
Karol Nass,
Anton Meinhart,
Thomas R. M. Barends,
Lutz Foucar,
Alexander Gorel,
Andrew Aquila,
Sabine Botha,
R. Bruce Doak,
Jason Koglin,
Mengning Liang,
Robert L. Shoeman,
Garth Williams,
Sebastien Boutet,
Ilme Schlichting
Affiliations
Karol Nass
Department of Biomolecular Mechanisms, Max Planck Institute for Medical Research, Jahnstrasse 29, 69120 Heidelberg, Germany
Anton Meinhart
Department of Biomolecular Mechanisms, Max Planck Institute for Medical Research, Jahnstrasse 29, 69120 Heidelberg, Germany
Thomas R. M. Barends
Department of Biomolecular Mechanisms, Max Planck Institute for Medical Research, Jahnstrasse 29, 69120 Heidelberg, Germany
Lutz Foucar
Department of Biomolecular Mechanisms, Max Planck Institute for Medical Research, Jahnstrasse 29, 69120 Heidelberg, Germany
Alexander Gorel
Department of Biomolecular Mechanisms, Max Planck Institute for Medical Research, Jahnstrasse 29, 69120 Heidelberg, Germany
Andrew Aquila
European XFEL GmbH, Albert-Einstein-Ring 19, 22761 Hamburg, Germany
Sabine Botha
Department of Biomolecular Mechanisms, Max Planck Institute for Medical Research, Jahnstrasse 29, 69120 Heidelberg, Germany
R. Bruce Doak
Department of Biomolecular Mechanisms, Max Planck Institute for Medical Research, Jahnstrasse 29, 69120 Heidelberg, Germany
Jason Koglin
SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, CA 94025, USA
Mengning Liang
SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, CA 94025, USA
Robert L. Shoeman
Department of Biomolecular Mechanisms, Max Planck Institute for Medical Research, Jahnstrasse 29, 69120 Heidelberg, Germany
Garth Williams
SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, CA 94025, USA
Sebastien Boutet
SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, CA 94025, USA
Ilme Schlichting
Department of Biomolecular Mechanisms, Max Planck Institute for Medical Research, Jahnstrasse 29, 69120 Heidelberg, Germany
DOI
https://doi.org/10.1107/S2052252516002980
Journal volume & issue
Vol. 3,
no. 3
pp.
180
– 191
Abstract
Read online
Serial femtosecond crystallography (SFX) at X-ray free-electron lasers (XFELs) offers unprecedented possibilities for macromolecular structure determination of systems that are prone to radiation damage. However, phasing XFEL data de novo is complicated by the inherent inaccuracy of SFX data, and only a few successful examples, mostly based on exceedingly strong anomalous or isomorphous difference signals, have been reported. Here, it is shown that SFX data from thaumatin microcrystals can be successfully phased using only the weak anomalous scattering from the endogenous S atoms. Moreover, a step-by-step investigation is presented of the particular problems of SAD phasing of SFX data, analysing data from a derivative with a strong anomalous signal as well as the weak signal from endogenous S atoms.
Keywords
Published in IUCrJ
ISSN
2052-2525 (Online)
Publisher
International Union of Crystallography
Country of publisher
United Kingdom
LCC subjects
Science: Chemistry: Crystallography
Website
https://journals.iucr.org/m/
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