Nature Communications (Jun 2021)

Spatio-temporal mRNA tracking in the early zebrafish embryo

  • Karoline Holler,
  • Anika Neuschulz,
  • Philipp Drewe-Boß,
  • Janita Mintcheva,
  • Bastiaan Spanjaard,
  • Roberto Arsiè,
  • Uwe Ohler,
  • Markus Landthaler,
  • Jan Philipp Junker

DOI
https://doi.org/10.1038/s41467-021-23834-1
Journal volume & issue
Vol. 12, no. 1
pp. 1 – 13

Abstract

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Early stages of embryogenesis are known to depend on subcellular localization and transport of maternal mRNA, but systematic analyses have been hindered by a lack of methods for tracking of RNA. Here the authors combine spatially-resolved transcriptomics and single-cell RNA labeling to perform a spatio-temporal analysis of the transcriptome during early zebrafish development, revealing insights into this process.