Indonesian Journal of Halal Research (Aug 2022)

Design and Performance Test of Specific Primers to Detect Bovine DNA Fragments using Multiplex PCR Technique for Halal Authentification

  • Joni Kusnadi,
  • Kevin Hohn Hernandi,
  • Khotibul Umam Al-Awwaly,
  • Estri Laras Arumingtyas,
  • Hilda Maghfirotu Hakiki,
  • Nur Istianah

DOI
https://doi.org/10.15575/ijhar.v4i2.15573
Journal volume & issue
Vol. 4, no. 2
pp. 45 – 52

Abstract

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Adulterating meat products with several species, including non-halal species, is often found in commercial products. This study aims to design and validate the Cytochrome c oxidase subunit I (CO1) primers to detect the non-halal species. A pair of species-specific primers encoding the CO1 gene were designed to amplify bovine DNA, tested for specificity, and applied in multiplex polymerase chain reaction (PCR) technique with D-loop primers for pigs, Cyt-b for rats, and 12S rRNA for dogs. The CO1 primers, along with D-loop primers for porcine, Cyt-b primers for rats, and 12S rRNA primers for dogs can be used to detect specific bovine DNA with a size of 279 bp and sequence similarity of 96%. In addition, dog, rat, and porcine DNA were amplified at 101, 603, and 951 bp, respectively. These four primers are specific and can amplify the target DNA to detect non-halal meat component contamination in a single reaction process.

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