Genome Biology (Jun 2023)

CATI: an efficient gene integration method for rodent and primate embryos by MMEJ suppression

  • Hongyu Chen,
  • Xingchen Liu,
  • Lanxin Li,
  • Qingtong Tan,
  • Shiyan Li,
  • Li Li,
  • Chunyang Li,
  • Jiqiang Fu,
  • Yong Lu,
  • Yan Wang,
  • Yidi Sun,
  • Zhen-Ge Luo,
  • Zongyang Lu,
  • Qiang Sun,
  • Zhen Liu

DOI
https://doi.org/10.1186/s13059-023-02987-w
Journal volume & issue
Vol. 24, no. 1
pp. 1 – 22

Abstract

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Abstract The efficiency of homology-directed repair (HDR) plays a crucial role in the development of animal models and gene therapy. We demonstrate that microhomology-mediated end-joining (MMEJ) constitutes a substantial proportion of DNA repair during CRISPR-mediated gene editing. Using CasRx to downregulate a key MMEJ factor, Polymerase Q (Polq), we improve the targeted integration efficiency of linearized DNA fragments and single-strand oligonucleotides (ssODN) in mouse embryos and offspring. CasRX-assisted targeted integration (CATI) also leads to substantial improvements in HDR efficiency during the CRISPR/Cas9 editing of monkey embryos. We present a promising tool for generating monkey models and developing gene therapies for clinical trials.