Nature Communications (Jun 2019)

Conserved transcriptomic profile between mouse and human colitis allows unsupervised patient stratification

  • Paulo Czarnewski,
  • Sara M. Parigi,
  • Chiara Sorini,
  • Oscar E. Diaz,
  • Srustidhar Das,
  • Nicola Gagliani,
  • Eduardo J. Villablanca

DOI
https://doi.org/10.1038/s41467-019-10769-x
Journal volume & issue
Vol. 10, no. 1
pp. 1 – 11

Abstract

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Clinical and molecular heterogeneity of ulcerative colitis presents unresolved challenges to identify predictive biomarkers of response to therapies. Here, the authors combine mouse colitis time course with patient biopsy transcriptomes, achieving unsupervised clustering of UC patients correlating with therapeutic outcomes in independent data sets.