Haematologica
(Jul 2020)
Genetic variation near CXCL12 is associated with susceptibility to HIV-related non-Hodgkin lymphoma
Christian W. Thorball,
Tiphaine Oudot-Mellakh,
Nava Ehsan,
Christian Hammer,
Federico A. Santoni,
Jonathan Niay,
Dominique Costagliola,
Cécile Goujard,
Laurence Meyer,
Sophia S. Wang,
Shehnaz K. Hussain,
Ioannis Theodorou,
Matthias Cavassini,
Andri Rauch,
Manuel Battegay,
Matthias Hoffmann,
Patrick Schmid,
Enos Bernasconi,
Huldrych F. Günthard,
Pejman Mohammadi,
Paul J. McLaren,
Charles S. Rabkin,
Caroline Besson,
Jacques Fellay
Affiliations
Christian W. Thorball
Ecole Polytechnique Federale de Lausanne, Swiss Institute of Bioinformatics, Lausanne, Switzerland;
Tiphaine Oudot-Mellakh
Centre de genetique moleculaire et chromosomique, GH La Pitié Salpetriere, Paris, France;
Nava Ehsan
Scripps Research Translational Institute, La Jolla, CA, USA;
Christian Hammer
Dept. of Cancer Immunology & Human Genetics, Genentech, South San Francisco, CA, USA;
Federico A. Santoni
Dept. of Endocrinology, Diabetology and Metabolism, Lausanne University Hospital, Switzerland;
Jonathan Niay
Centre de genetique moleculaire et chromosomique, GH La Pitié Salpetriere, Paris, France;
Dominique Costagliola
Sorbonne Université, Institut Pierre Louis d'epidemiologie, Paris, France;
Cécile Goujard
Paris-Sud University and Bicêtre Hospital, Le Kremlin-Bicêtre, France;
Laurence Meyer
Paris-Sud University, Le Kremlin-Bicêtre, France;
Sophia S. Wang
Division of Health Analytics, City of Hope Beckman Research Institute, Duarte, CA, USA;
Shehnaz K. Hussain
Department of Medicine, Cedars-Sinai Medical Center, Los Angeles, CA, USA;
Ioannis Theodorou
Centre de genetique moleculaire et chromosomique, GH La Pitié Salpetriere, Paris, France;
Matthias Cavassini
Service of Infectious Diseases, Lausanne University Hospital and University of Lausanne, Switzerland;
Andri Rauch
Dept. of Infectious Diseases, Bern University Hospital, University of Bern, Switzerland;
Manuel Battegay
Dept. of Infectious Diseases and Hospital Epidemiology, University Hospital Basel, Switzerland;
Matthias Hoffmann
Division of Infectious Diseases and Hospital Epidemiology, Kantonsspital Olten, Switzerland;
Patrick Schmid
Division of Infectious Diseases, Cantonal Hospital of St. Gallen, St. Gallen, Switzerland;
Enos Bernasconi
Division of Infectious Diseases, Regional Hospital of Lugano, Lugano, Switzerland;
Huldrych F. Günthard
Institute of Medical Virology, University of Zurich, Switzerland;
Pejman Mohammadi
Scripps Research Translational Institute, La Jolla, CA, USA;
Paul J. McLaren
JC Wilt Infectious Diseases Research Centre, Public Health Agency of Canada, Winnipeg, Canada;
Charles S. Rabkin
Division of Cancer Epidemiology and Genetics, National Cancer Institute, Rockville, MD, USA;
Caroline Besson
Department of Hematology and Oncology, Hospital of Versailles, Le Chesnay, France;
Jacques Fellay
Ecole Polytechnique Federale de Lausanne and University of Lausanne, Switzerland
DOI
https://doi.org/10.3324/haematol.2020.247023
Journal volume & issue
Vol. 106,
no. 8
Abstract
Read online
Human immunodeficiency virus (HIV) infection is associated with an increased risk of non-Hodgkin lymphoma (NHL). Even in the era of suppressive antiretroviral treatment, HIV-infected individuals remain at higher risk of developing NHL compared to the general population. To identify potential genetic risk loci, we performed case-control genome-wide association studies and a meta-analysis across three cohorts of HIV+ patients of European ancestry, including a total of 278 cases and 1924 matched controls. We observed a significant association with NHL susceptibility in the C-X-C motif chemokine ligand 12 (CXCL12) region on chromosome 10. A fine mapping analysis identified rs7919208 as the most likely causal variant (P = 4.77e-11), with the G>A polymorphism creating a new transcription factor binding site for BATF and JUND. These results suggest a modulatory role of CXCL12 regulation in the increased susceptibility to NHL observed in the HIV-infected population.
Published in Haematologica
ISSN
0390-6078 (Print)
1592-8721 (Online)
Publisher
Ferrata Storti Foundation
Country of publisher
Italy
LCC subjects
Medicine: Internal medicine: Specialties of internal medicine: Diseases of the blood and blood-forming organs
Website
http://www.haematologica.org
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