Nature Communications (Nov 2018)

A computational framework to study sub-cellular RNA localization

  • Aubin Samacoits,
  • Racha Chouaib,
  • Adham Safieddine,
  • Abdel-Meneem Traboulsi,
  • Wei Ouyang,
  • Christophe Zimmer,
  • Marion Peter,
  • Edouard Bertrand,
  • Thomas Walter,
  • Florian Mueller

DOI
https://doi.org/10.1038/s41467-018-06868-w
Journal volume & issue
Vol. 9, no. 1
pp. 1 – 10

Abstract

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Automated analysis of RNA localisation in smFISH data has been elusive. Here, the authors simulate and use a large dataset of images to design and validate a framework for highly accurate classification of sub-cellular RNA localisation patterns from smFISH experiments.