Biomolecules (May 2022)

A High Throughput Lipidomics Method Using <i>Scheduled</i> Multiple Reaction Monitoring

  • Akash Kumar Bhaskar,
  • Salwa Naushin,
  • Arjun Ray,
  • Praveen Singh,
  • Anurag Raj,
  • Shalini Pradhan,
  • Khushboo Adlakha,
  • Towfida Jahan Siddiqua,
  • Dipankar Malakar,
  • Debasis Dash,
  • Shantanu Sengupta

DOI
https://doi.org/10.3390/biom12050709
Journal volume & issue
Vol. 12, no. 5
p. 709

Abstract

Read online

Lipid compositions of cells, tissues, and bio-fluids are complex, with varying concentrations and structural diversity making their identification challenging. Newer methods for comprehensive analysis of lipids are thus necessary. Herein, we propose a targeted-mass spectrometry based lipidomics screening method using a combination of variable retention time window and relative dwell time weightage. Using this method, we identified more than 1000 lipid species within 24-min. The limit of detection varied from the femtomolar to the nanomolar range. About 883 lipid species were detected with a coefficient of variance 12 deficiency and found a total of 18 lipid species to be altered. Some of the lipid species with ω-6 fatty acid chains were found to be significantly increased while ω-3 decreased in vitamin B12 deficient samples. This method enables rapid screening of a large number of lipid species in a single experiment and would substantially advance our understanding of the role of lipids in biological processes.

Keywords