Experimental and Molecular Medicine (Sep 2020)

Single-cell sequencing techniques from individual to multiomics analyses

  • Yukie Kashima,
  • Yoshitaka Sakamoto,
  • Keiya Kaneko,
  • Masahide Seki,
  • Yutaka Suzuki,
  • Ayako Suzuki

DOI
https://doi.org/10.1038/s12276-020-00499-2
Journal volume & issue
Vol. 52, no. 9
pp. 1419 – 1427

Abstract

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Single-cell sequencing: Greater insight through integrated data Combining data from different single-cell sequencing techniques could greatly improve understanding of the molecular profiles associated with disease. Sequencing studies provide valuable insights into diseased and healthy states at a single-cell level, for example the evolutionary paths of brain tumors and cancerous mutations. Ayako Suzuki at the University of Tokyo in Chiba, Japan, and co-workers examined the challenges of integrating data from various experimental and computational single-cell sequencing methods. These methods usually determine the genomic, epigenomic (DNA modifications) or transcriptomic (messenger RNAs) state of a cell, and can be combined to create a detailed picture. Other ‘multiomics’ techniques provide multilayered information from the same cell. The researchers recommend detailed analysis of individual data layers prior to integration, and highlight emerging techniques that analyze larger tissue sections, thus retaining the temporal and spatial information around a cell.