F1000Research (Jun 2017)

A very simple, re-executable neuroimaging publication [version 2; referees: 1 approved, 2 approved with reservations]

  • Satrajit S. Ghosh,
  • Jean-Baptiste Poline,
  • David B. Keator,
  • Yaroslav O. Halchenko,
  • Adam G. Thomas,
  • Daniel A. Kessler,
  • David N. Kennedy

DOI
https://doi.org/10.12688/f1000research.10783.2
Journal volume & issue
Vol. 6

Abstract

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Reproducible research is a key element of the scientific process. Re-executability of neuroimaging workflows that lead to the conclusions arrived at in the literature has not yet been sufficiently addressed and adopted by the neuroimaging community. In this paper, we document a set of procedures, which include supplemental additions to a manuscript, that unambiguously define the data, workflow, execution environment and results of a neuroimaging analysis, in order to generate a verifiable re-executable publication. Re-executability provides a starting point for examination of the generalizability and reproducibility of a given finding.

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