Communications Biology (Jan 2023)

Accuracy of haplotype estimation and whole genome imputation affects complex trait analyses in complex biobanks

  • Vivek Appadurai,
  • Jonas Bybjerg-Grauholm,
  • Morten Dybdahl Krebs,
  • Anders Rosengren,
  • Alfonso Buil,
  • Andrés Ingason,
  • Ole Mors,
  • Anders D. Børglum,
  • David M. Hougaard,
  • Merete Nordentoft,
  • Preben B. Mortensen,
  • Olivier Delaneau,
  • Thomas Werge,
  • Andrew J. Schork

DOI
https://doi.org/10.1038/s42003-023-04477-y
Journal volume & issue
Vol. 6, no. 1
pp. 1 – 12

Abstract

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An analysis of phasing and imputation performances using iPSYCH consortium data across multiple methods and data integration protocols provides a useful framework in designing workflows to construct next-generation biobanks or conduct biobank-scale analyses.