Journal of Clinical Medicine (May 2020)

Machine Learning Enables Prediction of Cardiac Amyloidosis by Routine Laboratory Parameters: A Proof-of-Concept Study

  • Asan Agibetov,
  • Benjamin Seirer,
  • Theresa-Marie Dachs,
  • Matthias Koschutnik,
  • Daniel Dalos,
  • René Rettl,
  • Franz Duca,
  • Lore Schrutka,
  • Hermine Agis,
  • Renate Kain,
  • Michela Auer-Grumbach,
  • Christina Binder,
  • Julia Mascherbauer,
  • Christian Hengstenberg,
  • Matthias Samwald,
  • Georg Dorffner,
  • Diana Bonderman

DOI
https://doi.org/10.3390/jcm9051334
Journal volume & issue
Vol. 9, no. 5
p. 1334

Abstract

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(1) Background: Cardiac amyloidosis (CA) is a rare and complex condition with poor prognosis. While novel therapies improve outcomes, many affected individuals remain undiagnosed due to a lack of awareness among clinicians. This study was undertaken to develop an expert-independent machine learning (ML) prediction model for CA relying on routinely determined laboratory parameters. (2) Methods: In a first step, we developed baseline linear models based on logistic regression. In a second step, we used an ML algorithm based on gradient tree boosting to improve our linear prediction model, and to perform non-linear prediction. Then, we compared the performance of all diagnostic algorithms. All prediction models were developed on a training cohort, consisting of patients with proven CA (positive cases, n = 121) and amyloidosis-unrelated heart failure (HF) patients (negative cases, n = 415). Performances of all prediction models were evaluated on a separate prognostic validation cohort with 37 CA-positive and 124 CA-negative patients. (3) Results: Our best model, based on gradient-boosted ensembles of decision trees, achieved an area under the receiver operating characteristic curve (ROC AUC) score of 0.86, with sensitivity and specificity of 89.2% and 78.2%, respectively. The best linear model had an ROC AUC score of 0.75, with sensitivity and specificity of 84.6 and 71.7, respectively. (4) Conclusions: Our work demonstrates that ML makes it possible to utilize basic laboratory parameters to generate a distinct CA-related HF profile compared with CA-unrelated HF patients. This proof-of-concept study opens a potential new avenue in the diagnostic workup of CA and may assist physicians in clinical reasoning.

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