PeerJ (Jul 2024)

Innovative infrastructure to access Brazilian fungal diversity using deep learning

  • Thiago Chaves,
  • Joicymara Santos Xavier,
  • Alfeu Gonçalves dos Santos,
  • Kelmer Martins-Cunha,
  • Fernanda Karstedt,
  • Thiago Kossmann,
  • Susanne Sourell,
  • Eloisa Leopoldo,
  • Miriam Nathalie Fortuna Ferreira,
  • Roger Farias,
  • Mahatmã Titton,
  • Genivaldo Alves-Silva,
  • Felipe Bittencourt,
  • Dener Bortolini,
  • Emerson L. Gumboski,
  • Aldo von Wangenheim,
  • Aristóteles Góes-Neto,
  • Elisandro Ricardo Drechsler-Santos

DOI
https://doi.org/10.7717/peerj.17686
Journal volume & issue
Vol. 12
p. e17686

Abstract

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In the present investigation, we employ a novel and meticulously structured database assembled by experts, encompassing macrofungi field-collected in Brazil, featuring upwards of 13,894 photographs representing 505 distinct species. The purpose of utilizing this database is twofold: firstly, to furnish training and validation for convolutional neural networks (CNNs) with the capacity for autonomous identification of macrofungal species; secondly, to develop a sophisticated mobile application replete with an advanced user interface. This interface is specifically crafted to acquire images, and, utilizing the image recognition capabilities afforded by the trained CNN, proffer potential identifications for the macrofungal species depicted therein. Such technological advancements democratize access to the Brazilian Funga, thereby enhancing public engagement and knowledge dissemination, and also facilitating contributions from the populace to the expanding body of knowledge concerning the conservation of macrofungal species of Brazil.

Keywords