Frontiers in Neuroscience (Oct 2019)

Hypomethylation of 111 Probes Predicts Poor Prognosis for Glioblastoma

  • Qi Chen,
  • Qi Chen,
  • Min Zhao,
  • Min Zhao,
  • Chengliang Yin,
  • Chengliang Yin,
  • Shiyu Feng,
  • Jian Hu,
  • Qiang Zhang,
  • Xiaodong Ma,
  • Wanguo Xue,
  • Wanguo Xue,
  • Jinlong Shi,
  • Jinlong Shi,
  • Jinlong Shi

DOI
https://doi.org/10.3389/fnins.2019.01137
Journal volume & issue
Vol. 13

Abstract

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Glioblastoma (GBM) is a complicated brain tumor with heterogeneous outcome. Identification of effective biomarkers is an urgent need for the treatment decision-making and precise evaluation of prognosis. Based on a relatively large dataset of genome-wide methylation (138 glioblastoma patients), a joint-score of 111 methyl-probes was found to be of statistical significance for prognostic evaluation. Low joint-score were significantly associated with adverse outcomes (OS: P < 0.001, PFS: P = 0.03). Multivariable analyses adjusted for known risk factors confirmed the low joint-score of 111 methyl-probes as a high risk factor. The prognostic value of the methylated joint-score was further validated in another dataset of glioblastoma patients (OS: P = 0.006). Additionally, variance analysis revealed that aberrant genetic and epigenetic alterations were significantly associated with the joint-score of those methyl-probes. In conclusion, our results supported the joint-score of 111 methyl-probes as a potential prognosticator for the precision treatment of glioblastoma.

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