IUCrJ (Nov 2019)

Mutagenesis facilitated crystallization of GLP-1R

  • Yueming Xu,
  • Yuxia Wang,
  • Yang Wang,
  • Kaiwen Liu,
  • Yao Peng,
  • Deqiang Yao,
  • Houchao Tao,
  • Haiguang Liu,
  • Gaojie Song

DOI
https://doi.org/10.1107/S2052252519013496
Journal volume & issue
Vol. 6, no. 6
pp. 996 – 1006

Abstract

Read online

The class B family of G-protein-coupled receptors (GPCRs) has long been a paradigm for peptide hormone recognition and signal transduction. One class B GPCR, the glucagon-like peptide-1 receptor (GLP-1R), has been considered as an anti-diabetes drug target and there are several peptidic drugs available for the treatment of this overwhelming disease. The previously determined structures of inactive GLP-1R in complex with two negative allosteric modulators include ten thermal-stabilizing mutations that were selected from a total of 98 designed mutations. Here we systematically summarize all 98 mutations we have tested and the results suggest that the mutagenesis strategy that strengthens inter-helical hydrophobic interactions shows the highest success rate. We further investigate four back mutations by thermal-shift assay, crystallization and molecular dynamic simulations, and conclude that mutation I1962.66bF increases thermal stability intrinsically and that mutation S2714.47bA decreases crystal packing entropy extrinsically, while mutations S1932.63bC and M2333.36bC may be dispensable since these two cysteines are not disulfide-linked. Our results indicate intrinsic connections between different regions of GPCR transmembrane helices and the current data suggest a general mutagenesis principle for structural determination of GPCRs and other membrane proteins.

Keywords