Ornamental Plant Research (Jan 2023)
The Annona montana genome reveals the development and flavor formation in mountain soursop fruit
- Guangda Tang,
- Guizhen Chen,
- Jianhao Ke,
- Jieyu Wang,
- Diyang Zhang,
- Dingkun Liu,
- Jie Huang,
- Sijin Zeng,
- Miao Liao,
- Xuefen Wei,
- Zihao Huang,
- Minghui Ou,
- Jian Zeng,
- Hao Wu,
- Jie Zheng,
- Kewei Liu,
- Weihong Sun,
- Xuedie Liu,
- Xia Yu,
- Xinyu Xu,
- Xuewei Zhao,
- Yuanyuan Li,
- Zhuang Zhao,
- Deqiang Chen,
- Qinyao Zheng,
- Xin He,
- Mengmeng Zhang,
- Ye Huang,
- Cuili Zhang,
- Minghe Li,
- Zhiwen Wang,
- Sagheer Ahmad,
- Shengxin Chang,
- Shuangquan Zou,
- Laiqiang Huang,
- Donghui Peng,
- Siren Lan,
- Zhongjian Liu
Affiliations
- Guangda Tang
- College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, China
- Guizhen Chen
- Key Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, China
- Jianhao Ke
- College of Agriculture, South China Agricultural University, Guangzhou 510642, China
- Jieyu Wang
- College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, China
- Diyang Zhang
- Key Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, China
- Dingkun Liu
- Key Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, China
- Jie Huang
- Key Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, China
- Sijin Zeng
- College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, China
- Miao Liao
- College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, China
- Xuefen Wei
- College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, China
- Zihao Huang
- College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, China
- Minghui Ou
- College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, China
- Jian Zeng
- Henry Fok College of Biology and Agriculture, Shaoguan University, Shaoguan 512005, China
- Hao Wu
- Henry Fok College of Biology and Agriculture, Shaoguan University, Shaoguan 512005, China
- Jie Zheng
- Henry Fok College of Biology and Agriculture, Shaoguan University, Shaoguan 512005, China
- Kewei Liu
- Tsinghua-Berkeley Shenzhen Institute (TBSI), Center for Biotechnology and Biomedicine, Shenzhen Key Laboratory of Gene and Antibody Therapy, State Key Laboratory of Chemical Oncogenomics, State Key Laboratory of Health Sciences and Technology, Institute of Biopharmaceutical and Health Engineering (iBHE), Shenzhen International Graduate School, Tsinghua University, Shenzhen 518055, China
- Weihong Sun
- Key Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, China
- Xuedie Liu
- Key Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, China
- Xia Yu
- Key Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, China
- Xinyu Xu
- Key Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, China
- Xuewei Zhao
- Key Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, China
- Yuanyuan Li
- Key Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, China
- Zhuang Zhao
- Key Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, China
- Deqiang Chen
- Key Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, China
- Qinyao Zheng
- Key Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, China
- Xin He
- Key Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, China
- Mengmeng Zhang
- Key Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, China
- Ye Huang
- Key Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, China
- Cuili Zhang
- Key Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, China
- Minghe Li
- Key Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, China
- Zhiwen Wang
- PubBio-Tech, Wuhan 430070, China
- Sagheer Ahmad
- Key Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, China
- Shengxin Chang
- Henry Fok College of Biology and Agriculture, Shaoguan University, Shaoguan 512005, China
- Shuangquan Zou
- Key Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, China
- Laiqiang Huang
- Tsinghua-Berkeley Shenzhen Institute (TBSI), Center for Biotechnology and Biomedicine, Shenzhen Key Laboratory of Gene and Antibody Therapy, State Key Laboratory of Chemical Oncogenomics, State Key Laboratory of Health Sciences and Technology, Institute of Biopharmaceutical and Health Engineering (iBHE), Shenzhen International Graduate School, Tsinghua University, Shenzhen 518055, China
- Donghui Peng
- Key Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, China
- Siren Lan
- Key Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, China
- Zhongjian Liu
- College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, China
- DOI
- https://doi.org/10.48130/OPR-2023-0014
- Journal volume & issue
-
Vol. 3,
no. 1
pp. 1 – 13
Abstract
Annona is a genus of family Annonaceae within the magnoliids and plays a crucial role in revealing the evolution of magnolias. Annona species provide important fruit resources. Here, we report a chromosome-level genome assembly of A. montana, an edible and ornamental fruit species. Integration with other genomes provides clear evidence that the magnoliids were sisters to eudicots, and the ASTRAL trees showed discordance in the phylogenetic position of magnoliids, which might be caused by incomplete lineage sorting (ILS). Whole genome duplication (WGD) analysis showed that the common ancestor of A. montana and Liriodendron chinense experienced a WGD event, and this WGD event occurred after the splitting of Magnoliales and Laurales. We identified the gene family expansions and contractions in Annonaceae. Based on the identification of MADS-box gene families, we inferred the pathway integrators of morphological regulation, the occurrence of florescence and the development of fruit in A. montana. In addition, we identified key sugar transporter genes and the key enzyme genes related to sugar accumulation in A. montana fruit. The gene function analysis indicated that starch and cell wall degradation might be the main reasons for the softening of A. montana fruit. Furthermore, aromatic alcohols were suggested be the main volatile aromatic compounds in A. montana fruit. Our results provide the genetic basis of fruit development, softening, aroma, and sugar accumulation in A. montana and the evolution and diversification of Annonaceae.
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