Nature Communications (Oct 2019)

Biological process activity transformation of single cell gene expression for cross-species alignment

  • Hongxu Ding,
  • Andrew Blair,
  • Ying Yang,
  • Joshua M. Stuart

DOI
https://doi.org/10.1038/s41467-019-12924-w
Journal volume & issue
Vol. 10, no. 1
pp. 1 – 6

Abstract

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Single cell RNA-Seq data can report on cellular types and states, but low signal-to noise and sparse data can make interpretation of cellular state difficult. Here the authors propose a transformation strategy to map RNA-Seq data to biological process activities that are species-agnostic and allow for comparison across species.