Scientific Data (Jan 2024)

Chromosome-level genome assembly of the giant ladybug Megalocaria dilatata

  • De-Qiang Pu,
  • Xing-Long Wu,
  • Zhi-Teng Chen,
  • Shu-Jun Wei,
  • Peng Cai,
  • Hong-Ling Liu

DOI
https://doi.org/10.1038/s41597-024-02990-1
Journal volume & issue
Vol. 11, no. 1
pp. 1 – 7

Abstract

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Abstract The giant ladybug Megalocaria dilatata (Fabricius) is a potential biocontrol agent and a valuable model for coccinellid genomics and evolutionary biology. However, the lack of a reference genome for M. dilatata has impeded further explorations into its evolution and constrained its use in pest management. Here, we assembled and annotated a high-quality, chromosome-level genome of M. dilatata. The resulting assembly spans 772.3 Mb, with a scaffold N50 of 72.48 Mb and a GC content of 34.23%. The Hi-C data aided in anchoring the assembly onto 10 chromosomes ranging from 43.35 to 108.16 Mb. We identified 493.33 Mb of repeat sequences, accounting for 63.88% of the assembled genome. Our gene prediction identified 25,346 genes, with 81.89% annotated in public protein databases. The genome data will provide a valuable resource for studying the biology and evolution of Coccinellidae, aiding in pest control strategies and advancing research in the field.