Nature Communications (Nov 2018)

High throughput in situ metagenomic measurement of bacterial replication at ultra-low sequencing coverage

  • Akintunde Emiola,
  • Julia Oh

DOI
https://doi.org/10.1038/s41467-018-07240-8
Journal volume & issue
Vol. 9, no. 1
pp. 1 – 8

Abstract

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Bacterial growth rate can change under different environmental conditions and reveals important biological and ecological information. Here, the authors develop GRiD, a bioinformatics tool for high-throughput estimation of growth rate using low coverage metagenomic data.