Survey and molecular characterization of begomovirus, and assessment of yield losses caused by leaf curl disease of sunflower (Helianthus annuus)

Abstract

A comprehensive survey was conducted during winter (rabi) and rainy (kharif) seasons of 2019–20 to 2021–22 in the Kurnool, Nandyal, and Prakasam districts of Andhra Pradesh, focusing on the incidence of leaf curl disease in hybrid sunflower (Helianthus annuus L.) crop. The results revealed a high incidence of the disease, ranging from 40–94.5% across most of the surveyed hybrid varieties. Leaf curl-infected samples collected from the surveyed fields were analyzed by PCR using specific primers for the DNA-A component of the virus to confirm the presence of the pathogen. The PCR-amplified fragments were cloned and sequenced. Sequence analysis revealed that the sunflower isolate (Snf-AP) shared 99.2% nucleotide identity with the tomato leaf curl Karnataka virus (ToLCKV), which infects sunflower crops in Karnataka. This indicates a strong geographical and genetic connection between the viral strains affecting sunflowers in Andhra Pradesh and Karnataka. This genetic similarity is significant, as it suggests that the same or closely related viral strains are responsible for sunflower leaf curl disease across broader regions. The disease was found to affect sunflowers at all growth stages, with the highest incidence (42.3%) observed at the star bud stage. Infection at the star bud stage leads to substantial seed yield losses, with reductions of up to 82.8%. This level of damage underscores the economic impact of early infections, as yield losses of this magnitude can severely affect the profitability of sunflower farming. Additionally, a positive correlation was found between the whitefly population, weather parameters, and disease development.

Keywords

• Leaf curl, PCR, Phylogenetic analysis, Sunflower, Survey, Yield losses