Institut des Sciences de l’Evolution de Montpellier (Université de Montpellier | CNRS | IRD | EPHE), Place Eugène Bataillon, Montpellier, France; Real Jardín Botánico (RJB), CSIC, Madrid, Spain
Alice Michel
Institut des Sciences de l’Evolution de Montpellier (Université de Montpellier | CNRS | IRD | EPHE), Place Eugène Bataillon, Montpellier, France; Department of Anthropology, University of California, Davis, United States
Pierre-Henri Fabre
Institut des Sciences de l’Evolution de Montpellier (Université de Montpellier | CNRS | IRD | EPHE), Place Eugène Bataillon, Montpellier, France; Mammal Section, The Natural History Museum, Cromwell Road, London, United Kingdom; Institut Universitaire de France (IUF), Paris, France
Oscar A Pérez Escobar
Royal Botanic Gardens, Kew, United Kingdom
Guillaume Chomicki
Ecology and Evolutionary Biology, University of Sheffield, Sheffield, United Kingdom
Ricarda Riina
Real Jardín Botánico (RJB), CSIC, Madrid, Spain
Alexandre Antonelli
Royal Botanic Gardens, Kew, United Kingdom; Gothenburg Global Biodiversity Centre, Department of Biological and Environmental Sciences, University of Gothenburg, Gothenburg, Sweden; Department of Plant Sciences, University of Oxford, Oxford, United Kingdom
Pierre-Olivier Antoine
Institut des Sciences de l’Evolution de Montpellier (Université de Montpellier | CNRS | IRD | EPHE), Place Eugène Bataillon, Montpellier, France
The origins and evolution of the outstanding Neotropical biodiversity are a matter of intense debate. A comprehensive understanding is hindered by the lack of deep-time comparative data across wide phylogenetic and ecological contexts. Here, we quantify the prevailing diversification trajectories and drivers of Neotropical diversification in a sample of 150 phylogenies (12,512 species) of seed plants and tetrapods, and assess their variation across Neotropical regions and taxa. Analyses indicate that Neotropical diversity has mostly expanded through time (70% of the clades), while scenarios of saturated and declining diversity account for 21% and 9% of Neotropical diversity, respectively. Five biogeographic areas are identified as distinctive units of long-term Neotropical evolution, including Pan-Amazonia, the Dry Diagonal, and Bahama-Antilles. Diversification dynamics do not differ across these areas, suggesting no geographic structure in long-term Neotropical diversification. In contrast, diversification dynamics differ across taxa: plant diversity mostly expanded through time (88%), while a substantial fraction (43%) of tetrapod diversity accumulated at a slower pace or declined towards the present. These opposite evolutionary patterns may reflect different capacities for plants and tetrapods to cope with past climate changes.