Nature Communications (Feb 2018)

scNMT-seq enables joint profiling of chromatin accessibility DNA methylation and transcription in single cells

  • Stephen J. Clark,
  • Ricard Argelaguet,
  • Chantriolnt-Andreas Kapourani,
  • Thomas M. Stubbs,
  • Heather J. Lee,
  • Celia Alda-Catalinas,
  • Felix Krueger,
  • Guido Sanguinetti,
  • Gavin Kelsey,
  • John C. Marioni,
  • Oliver Stegle,
  • Wolf Reik

DOI
https://doi.org/10.1038/s41467-018-03149-4
Journal volume & issue
Vol. 9, no. 1
pp. 1 – 9

Abstract

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Relationships between DNA methylation and transcription, and methylation and DNA accessibility can be probed but interrogating all three in the same single cells has not been possible. Here, the authors report the first single-cell method for parallel chromatin accessibility, DNA methylation and transcriptome profiling.