The complete chloroplast genome sequence of Altingia yunnanensis

Abstract

The first complete chloroplast genome (cpDNA) sequence of Altingia yunnanensis was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 160,860 bp in length, contains a large single-copy region (LSC) of 89,162 bp and a small single-copy region (SSC) of 19,008 bp, which were separated by a pair of inverted repeat (IR) regions of 26,325 bp each. The genome contains 130 genes, including 85 protein-coding genes, 8 ribosomal RNA genes, and 37 transfer RNA genes. Further, the phylogenomic analysis showed that A. yunnanensis and Altingia excelsa clustered in a clade in Saxifragales order.

Keywords

• altingia yunnanensis
• chloroplast
• illumina sequencing
• phylogenetic analysis