Frontiers in Human Neuroscience (Apr 2010)

An automated method for segmenting white matter lesions through multi-level morphometric feature classification with application to lupus

  • Mark Scully,
  • Mark Scully,
  • Blake Anderson,
  • Terran Lane,
  • Charles Gasparovic,
  • Charles Gasparovic,
  • Vince Magnotta,
  • Wilmer Sibbitt,
  • Carlos Roldan,
  • Ron Kikinis,
  • Henry Jeremy Bockholt,
  • Henry Jeremy Bockholt

DOI
https://doi.org/10.3389/fnhum.2010.00027
Journal volume & issue
Vol. 4

Abstract

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We demonstrate an automated, multi-level method to segment white matter brain lesions and apply it to lupus. The method makes use of local morphometric features based on multiple MR sequences, including T1-weighted, T2-weighted, and Fluid Attenuated Inversion Recovery. After preprocessing, including co-registration, brain extraction, bias correction, and intensity standardization, 49 features are calculated for each brain voxel based on local morphometry. At each level of segmentation a supervised classifier takes advantage of a different subset of the features to conservatively segment lesion voxels, passing on more difficult voxels to the next classifier. This multi-level approach allows for a fast lesion classification method with tunable trade-offs between sensitivity and specificity producing accuracy comparable to a human rater.

Keywords