Nature Communications (Aug 2020)

Entropy of a bacterial stress response is a generalizable predictor for fitness and antibiotic sensitivity

  • Zeyu Zhu,
  • Defne Surujon,
  • Juan C. Ortiz-Marquez,
  • Wenwen Huo,
  • Ralph R. Isberg,
  • José Bento,
  • Tim van Opijnen

DOI
https://doi.org/10.1038/s41467-020-18134-z
Journal volume & issue
Vol. 11, no. 1
pp. 1 – 15

Abstract

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Bacterial transcriptomic data have been used to predict antibiotic susceptibility in a species- or antibiotic-specific manner. Here, the authors show that global transcriptional disorder is a common stress response in bacteria with low fitness, and present a general approach that can predict bacterial fitness independently of species or type of stress.