F1000Research (Jun 2018)

Norwegian e-Infrastructure for Life Sciences (NeLS) [version 1; referees: 2 approved]

  • Kidane M. Tekle,
  • Sveinung Gundersen,
  • Kjetil Klepper,
  • Lars Ailo Bongo,
  • Inge Alexander Raknes,
  • Xiaxi Li,
  • Wei Zhang,
  • Christian Andreetta,
  • Teshome Dagne Mulugeta,
  • Matúš Kalaš,
  • Morten B. Rye,
  • Erik Hjerde,
  • Jeevan Karloss Antony Samy,
  • Ghislain Fornous,
  • Abdulrahman Azab,
  • Dag Inge Våge,
  • Eivind Hovig,
  • Nils Peder Willassen,
  • Finn Drabløs,
  • Ståle Nygård,
  • Kjell Petersen,
  • Inge Jonassen

DOI
https://doi.org/10.12688/f1000research.15119.1
Journal volume & issue
Vol. 7

Abstract

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The Norwegian e-Infrastructure for Life Sciences (NeLS) has been developed by ELIXIR Norway to provide its users with a system enabling data storage, sharing, and analysis in a project-oriented fashion. The system is available through easy-to-use web interfaces, including the Galaxy workbench for data analysis and workflow execution. Users confident with a command-line interface and programming may also access it through Secure Shell (SSH) and application programming interfaces (APIs). NeLS has been in production since 2015, with training and support provided by the help desk of ELIXIR Norway. Through collaboration with NorSeq, the national consortium for high-throughput sequencing, an integrated service is offered so that sequencing data generated in a research project is provided to the involved researchers through NeLS. Sensitive data, such as individual genomic sequencing data, are handled using the TSD (Services for Sensitive Data) platform provided by Sigma2 and the University of Oslo. NeLS integrates national e-infrastructure storage and computing resources, and is also integrated with the SEEK platform in order to store large data files produced by experiments described in SEEK. In this article, we outline the architecture of NeLS and discuss possible directions for further development.