Scientific Reports (May 2023)

Rapid and efficient ambient temperature X-ray crystal structure determination at Turkish Light Source

  • Mehmet Gul,
  • Esra Ayan,
  • Ebru Destan,
  • J. Austin Johnson,
  • Alaleh Shafiei,
  • Abdullah Kepceoğlu,
  • Merve Yilmaz,
  • Fatma Betül Ertem,
  • İlkin Yapici,
  • Bilge Tosun,
  • Nilüfer Baldir,
  • Nurettin Tokay,
  • Zeliş Nergiz,
  • Gözde Karakadioğlu,
  • Seyide Seda Paydos,
  • Cahine Kulakman,
  • Cengiz Kaan Ferah,
  • Ömür Güven,
  • Necati Atalay,
  • Enver Kamil Akcan,
  • Haluk Cetinok,
  • Nazlı Eylül Arslan,
  • Kardelen Şabanoğlu,
  • Bengisu Aşci,
  • Serra Tavli,
  • Helin Gümüsboğa,
  • Sevde Altuntaş,
  • Masami Otsuka,
  • Mikako Fujita,
  • Şaban Teki̇n,
  • Halilibrahim Çi̇ftçi̇,
  • Serdar Durdaği,
  • Ezgi Karaca,
  • Burcu Kaplan Türköz,
  • Burak Veli Kabasakal,
  • Ahmet Kati,
  • Hasan DeMi̇rci̇

DOI
https://doi.org/10.1038/s41598-023-33989-0
Journal volume & issue
Vol. 13, no. 1
pp. 1 – 10

Abstract

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Abstract High-resolution biomacromolecular structure determination is essential to better understand protein function and dynamics. Serial crystallography is an emerging structural biology technique which has fundamental limitations due to either sample volume requirements or immediate access to the competitive X-ray beamtime. Obtaining a high volume of well-diffracting, sufficient-size crystals while mitigating radiation damage remains a critical bottleneck of serial crystallography. As an alternative, we introduce the plate-reader module adapted for using a 72-well Terasaki plate for biomacromolecule structure determination at a convenience of a home X-ray source. We also present the first ambient temperature lysozyme structure determined at the Turkish light source (Turkish DeLight). The complete dataset was collected in 18.5 min with resolution extending to 2.39 Å and 100% completeness. Combined with our previous cryogenic structure (PDB ID: 7Y6A), the ambient temperature structure provides invaluable information about the structural dynamics of the lysozyme. Turkish DeLight provides robust and rapid ambient temperature biomacromolecular structure determination with limited radiation damage.