Nature Communications (Apr 2021)

Learning cis-regulatory principles of ADAR-based RNA editing from CRISPR-mediated mutagenesis

  • Xin Liu,
  • Tao Sun,
  • Anna Shcherbina,
  • Qin Li,
  • Inga Jarmoskaite,
  • Kalli Kappel,
  • Gokul Ramaswami,
  • Rhiju Das,
  • Anshul Kundaje,
  • Jin Billy Li

DOI
https://doi.org/10.1038/s41467-021-22489-2
Journal volume & issue
Vol. 12, no. 1
pp. 1 – 17

Abstract

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The RNA sequence and secondary structure regulate RNA editing by ADAR. Here the authors employ a CRISPR/Cas9-mediated saturation mutagenesis and machine learning to predict RNA editing efficiency of specific substrates.