Scientific Data (Nov 2022)

Benchmarking second and third-generation sequencing platforms for microbial metagenomics

  • Victoria Meslier,
  • Benoit Quinquis,
  • Kévin Da Silva,
  • Florian Plaza Oñate,
  • Nicolas Pons,
  • Hugo Roume,
  • Mircea Podar,
  • Mathieu Almeida

DOI
https://doi.org/10.1038/s41597-022-01762-z
Journal volume & issue
Vol. 9, no. 1
pp. 1 – 9

Abstract

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Measurement(s) mock community • Metagenomic profiling Technology Type(s) Illumina HiSeq 3000 • ThermoFisher Ion Proton and GeneStudio S5 • MGI DNBseq G400 and T7 • Oxford Nanopore Sequencing • PacBio Sequel System • Genome mapping and assembly Sample Characteristic - Organism Synthetic microbial communities • Bacteria • Archaea