Nature Communications (Jun 2022)

Phasing analysis of lung cancer genomes using a long read sequencer

  • Yoshitaka Sakamoto,
  • Shuhei Miyake,
  • Miho Oka,
  • Akinori Kanai,
  • Yosuke Kawai,
  • Satoi Nagasawa,
  • Yuichi Shiraishi,
  • Katsushi Tokunaga,
  • Takashi Kohno,
  • Masahide Seki,
  • Yutaka Suzuki,
  • Ayako Suzuki

DOI
https://doi.org/10.1038/s41467-022-31133-6
Journal volume & issue
Vol. 13, no. 1
pp. 1 – 17

Abstract

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Long-read sequencing technologies are useful for the multifaceted task of characterising somatic mutations, including structural variants, in cancers. Here, the authors combine short and long read sequencing for the phasing analysis, which enables them to resolve the chromosomal backgrounds of somatic mutations in Japanese non-small cell lung cancers.