Cell Reports (Sep 2024)
Areal specializations in the morpho-electric and transcriptomic properties of primate layer 5 extratelencephalic projection neurons
- Nikolai C. Dembrow,
- Scott Sawchuk,
- Rachel Dalley,
- Ximena Opitz-Araya,
- Mark Hudson,
- Cristina Radaelli,
- Lauren Alfiler,
- Sarah Walling-Bell,
- Darren Bertagnolli,
- Jeff Goldy,
- Nelson Johansen,
- Jeremy A. Miller,
- Kamiliam Nasirova,
- Scott F. Owen,
- Alejandro Parga-Becerra,
- Naz Taskin,
- Michael Tieu,
- David Vumbaco,
- Natalie Weed,
- Julia Wilson,
- Brian R. Lee,
- Kimberly A. Smith,
- Staci A. Sorensen,
- William J. Spain,
- Ed S. Lein,
- Steve I. Perlmutter,
- Jonathan T. Ting,
- Brian E. Kalmbach
Affiliations
- Nikolai C. Dembrow
- Department of Physiology and Biophysics, University of Washington, Seattle, WA 98195, USA; Epilepsy Center of Excellence, Department of Veterans Affairs Medical Center, Seattle, WA 98108, USA; Corresponding author
- Scott Sawchuk
- Allen Institute for Brain Science, Seattle, WA 98109, USA
- Rachel Dalley
- Allen Institute for Brain Science, Seattle, WA 98109, USA
- Ximena Opitz-Araya
- Allen Institute for Brain Science, Seattle, WA 98109, USA
- Mark Hudson
- Department of Physiology and Biophysics, University of Washington, Seattle, WA 98195, USA
- Cristina Radaelli
- Allen Institute for Brain Science, Seattle, WA 98109, USA
- Lauren Alfiler
- Allen Institute for Brain Science, Seattle, WA 98109, USA
- Sarah Walling-Bell
- Allen Institute for Brain Science, Seattle, WA 98109, USA
- Darren Bertagnolli
- Allen Institute for Brain Science, Seattle, WA 98109, USA
- Jeff Goldy
- Allen Institute for Brain Science, Seattle, WA 98109, USA
- Nelson Johansen
- Allen Institute for Brain Science, Seattle, WA 98109, USA
- Jeremy A. Miller
- Allen Institute for Brain Science, Seattle, WA 98109, USA
- Kamiliam Nasirova
- Allen Institute for Brain Science, Seattle, WA 98109, USA
- Scott F. Owen
- Allen Institute for Brain Science, Seattle, WA 98109, USA; Department of Neurosurgery, Stanford University School of Medicine, Stanford, CA 94304, USA
- Alejandro Parga-Becerra
- Department of Physiology and Biophysics, University of Washington, Seattle, WA 98195, USA; Seattle Children’s Research Institute, Seattle, WA 98101, USA
- Naz Taskin
- Allen Institute for Brain Science, Seattle, WA 98109, USA
- Michael Tieu
- Allen Institute for Brain Science, Seattle, WA 98109, USA
- David Vumbaco
- Allen Institute for Brain Science, Seattle, WA 98109, USA
- Natalie Weed
- Allen Institute for Brain Science, Seattle, WA 98109, USA
- Julia Wilson
- Allen Institute for Brain Science, Seattle, WA 98109, USA
- Brian R. Lee
- Allen Institute for Brain Science, Seattle, WA 98109, USA
- Kimberly A. Smith
- Allen Institute for Brain Science, Seattle, WA 98109, USA
- Staci A. Sorensen
- Allen Institute for Brain Science, Seattle, WA 98109, USA
- William J. Spain
- Department of Physiology and Biophysics, University of Washington, Seattle, WA 98195, USA; Epilepsy Center of Excellence, Department of Veterans Affairs Medical Center, Seattle, WA 98108, USA
- Ed S. Lein
- Allen Institute for Brain Science, Seattle, WA 98109, USA
- Steve I. Perlmutter
- Department of Physiology and Biophysics, University of Washington, Seattle, WA 98195, USA; Washington National Primate Research Center, Seattle, WA 98195, USA
- Jonathan T. Ting
- Department of Physiology and Biophysics, University of Washington, Seattle, WA 98195, USA; Allen Institute for Brain Science, Seattle, WA 98109, USA; Washington National Primate Research Center, Seattle, WA 98195, USA
- Brian E. Kalmbach
- Department of Physiology and Biophysics, University of Washington, Seattle, WA 98195, USA; Allen Institute for Brain Science, Seattle, WA 98109, USA; Corresponding author
- Journal volume & issue
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Vol. 43,
no. 9
p. 114718
Abstract
Summary: Large-scale analysis of single-cell gene expression has revealed transcriptomically defined cell subclasses present throughout the primate neocortex with gene expression profiles that differ depending upon neocortical region. Here, we test whether the interareal differences in gene expression translate to regional specializations in the physiology and morphology of infragranular glutamatergic neurons by performing Patch-seq experiments in brain slices from the temporal cortex (TCx) and motor cortex (MCx) of the macaque. We confirm that transcriptomically defined extratelencephalically projecting neurons of layer 5 (L5 ET neurons) include retrogradely labeled corticospinal neurons in the MCx and find multiple physiological properties and ion channel genes that distinguish L5 ET from non-ET neurons in both areas. Additionally, while infragranular ET and non-ET neurons retain distinct neuronal properties across multiple regions, there are regional morpho-electric and gene expression specializations in the L5 ET subclass, providing mechanistic insights into the specialized functional architecture of the primate neocortex.