Nature Communications (Nov 2022)

A comprehensive Bioconductor ecosystem for the design of CRISPR guide RNAs across nucleases and technologies

  • Luke Hoberecht,
  • Pirunthan Perampalam,
  • Aaron Lun,
  • Jean-Philippe Fortin

DOI
https://doi.org/10.1038/s41467-022-34320-7
Journal volume & issue
Vol. 13, no. 1
pp. 1 – 20

Abstract

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The success of CRISPR experiments relies on the choice of gRNA. Here the authors report crisprVerse, which enables efficient gRNA design and annotation for methods including CRISPRko, CRISPRa, CRISPRi, CRISPRbe and CRISPRkd, enabled for RNA- and DNA-targeting nucleases, including Cas9, Cas12 and Cas13.