Nature Communications (May 2021)

Landscape of allele-specific transcription factor binding in the human genome

  • Sergey Abramov,
  • Alexandr Boytsov,
  • Daria Bykova,
  • Dmitry D. Penzar,
  • Ivan Yevshin,
  • Semyon K. Kolmykov,
  • Marina V. Fridman,
  • Alexander V. Favorov,
  • Ilya E. Vorontsov,
  • Eugene Baulin,
  • Fedor Kolpakov,
  • Vsevolod J. Makeev,
  • Ivan V. Kulakovskiy

DOI
https://doi.org/10.1038/s41467-021-23007-0
Journal volume & issue
Vol. 12, no. 1
pp. 1 – 15

Abstract

Read online

Single-nucleotide variants in enhancers or promoters may affect gene transcription by altering transcription factor binding sites. Here the authors present a meta-analysis empowered by a new statistical method covering thousands of ChIP-Seq experiments resulting in the identification of more than 500 thousand allele-specific binding (ASB) events in the human genome.