We explore the theory of isolated vortices in strongly sheared, deep zonal flows and the stability of these banded jets, as occur in Jupiter’s atmosphere This is done using the standard 2-layer quasigeostrophic model with the lower layer depth becoming infinite; however, this model differs from the usual layer model because the lower layer is not assumed to be motionless but has a steady configuration of alternating zonal flows. Steady state vortices are obtained by a simulated annealing computational method as generalized to fluid problems with constraints and also used in the used in the context of magnetohydrodynamics. Various cases of vortices with a constant potential vorticity anomaly atop zonal winds and the stability of the underlying winds are considered using a mix of computational and analytical techniques.