Animals (Jul 2023)

Artificial Intelligence to Predict the BRAF V595E Mutation in Canine Urinary Bladder Urothelial Carcinomas

  • Leonore Küchler,
  • Caroline Posthaus,
  • Kathrin Jäger,
  • Franco Guscetti,
  • Louise van der Weyden,
  • Wolf von Bomhard,
  • Jarno M. Schmidt,
  • Dima Farra,
  • Heike Aupperle-Lellbach,
  • Alexandra Kehl,
  • Sven Rottenberg,
  • Simone de Brot

DOI
https://doi.org/10.3390/ani13152404
Journal volume & issue
Vol. 13, no. 15
p. 2404

Abstract

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In dogs, the BRAF mutation (V595E) is common in bladder and prostate cancer and represents a specific diagnostic marker. Recent advantages in artificial intelligence (AI) offer new opportunities in the field of tumour marker detection. While AI histology studies have been conducted in humans to detect BRAF mutation in cancer, comparable studies in animals are lacking. In this study, we used commercially available AI histology software to predict BRAF mutation in whole slide images (WSI) of bladder urothelial carcinomas (UC) stained with haematoxylin and eosin (HE), based on a training (n = 81) and a validation set (n = 96). Among 96 WSI, 57 showed identical PCR and AI-based BRAF predictions, resulting in a sensitivity of 58% and a specificity of 63%. The sensitivity increased substantially to 89% when excluding small or poor-quality tissue sections. Test reliability depended on tumour differentiation (p p p p BRAF mutation status in canine UC. Despite certain limitations, the results highlight the potential of AI in predicting molecular alterations in routine tissue sections.

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