Mathematical Biosciences and Engineering (Aug 2023)

Time-Resolved 3D cardiopulmonary MRI reconstruction using spatial transformer network

  • Qing Zou,
  • Zachary Miller,
  • Sanja Dzelebdzic ,
  • Maher Abadeer,
  • Kevin M. Johnson,
  • Tarique Hussain

DOI
https://doi.org/10.3934/mbe.2023712
Journal volume & issue
Vol. 20, no. 9
pp. 15982 – 15998

Abstract

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The accurate visualization and assessment of the complex cardiac and pulmonary structures in 3D is critical for the diagnosis and treatment of cardiovascular and respiratory disorders. Conventional 3D cardiac magnetic resonance imaging (MRI) techniques suffer from long acquisition times, motion artifacts, and limited spatiotemporal resolution. This study proposes a novel time-resolved 3D cardiopulmonary MRI reconstruction method based on spatial transformer networks (STNs) to reconstruct the 3D cardiopulmonary MRI acquired using 3D center-out radial ultra-short echo time (UTE) sequences. The proposed reconstruction method employed an STN-based deep learning framework, which used a combination of data-processing, grid generator, and sampler. The reconstructed 3D images were compared against the start-of-the-art time-resolved reconstruction method. The results showed that the proposed time-resolved 3D cardiopulmonary MRI reconstruction using STNs offers a robust and efficient approach to obtain high-quality images. This method effectively overcomes the limitations of conventional 3D cardiac MRI techniques and has the potential to improve the diagnosis and treatment planning of cardiopulmonary disorders.

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