STAR Protocols (Mar 2024)

Protocol for visualizing complex volatile metabolomics data in clinical setups using EDaViS software

  • Leo Ruehrmund,
  • Patricia Fuchs,
  • Julia Bartels,
  • Rasmus Remy,
  • Ann-Christin Klemenz,
  • Nele Kemnitz,
  • Phillip Trefz,
  • Pritam Sukul,
  • Wolfram Miekisch,
  • Jochen K. Schubert

Journal volume & issue
Vol. 5, no. 1
p. 102808

Abstract

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Summary: Here, we present a protocol for using Early Data Visualization Script, a user-friendly software tool to visualize complex volatile metabolomics data in clinical setups. We describe steps for tabulating data and adjusting visual output to visualize complex time-resolved volatile omics data using simple charts and graphs. We then demonstrate possible modifications by detailing procedures for the adaptation of four basic functions.For complete details on the use and execution of this protocol, please refer to Sukul et al. (2022)1 and Remy et al. (2022).2 : Publisher’s note: Undertaking any experimental protocol requires adherence to local institutional guidelines for laboratory safety and ethics.

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