Nature Communications (Jul 2022)

Co-optimization of therapeutic antibody affinity and specificity using machine learning models that generalize to novel mutational space

  • Emily K. Makowski,
  • Patrick C. Kinnunen,
  • Jie Huang,
  • Lina Wu,
  • Matthew D. Smith,
  • Tiexin Wang,
  • Alec A. Desai,
  • Craig N. Streu,
  • Yulei Zhang,
  • Jennifer M. Zupancic,
  • John S. Schardt,
  • Jennifer J. Linderman,
  • Peter M. Tessier

DOI
https://doi.org/10.1038/s41467-022-31457-3
Journal volume & issue
Vol. 13, no. 1
pp. 1 – 14

Abstract

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Optimising antibody properties such as affinity can be detrimental to other key properties. Here the authors use machine learning to simplify the identification of antibodies with co-optimal levels of affinity and specificity for a clinical-stage antibody that displays high levels of on- and off-target binding.