A De Novo Whole Genome Assembly and Annotation of Parelaphostrongylus tenuis

Garwood Tyler J.; Richards Jessie E.; Macchietto Marissa G.; Gerhold Richard W.; Kania Stephen A.; Garbe John R.; Fountain-Jones Nicholas M.; Larsen Peter A.; Wolf Tiffany M.

doi:10.2478/jofnem-2024-0009

Journal of Nematology (Mar 2024)

A De Novo Whole Genome Assembly and Annotation of Parelaphostrongylus tenuis

Garwood Tyler J.,
Richards Jessie E.,
Macchietto Marissa G.,
Gerhold Richard W.,
Kania Stephen A.,
Garbe John R.,
Fountain-Jones Nicholas M.,
Larsen Peter A.,
Wolf Tiffany M.

Affiliations

Garwood Tyler J.: Department of Veterinary Population Medicine, College of Veterinary Medicine, University of Minnesota-Twin Cities, Room 495 Animal Science/Veterinary Medicine Building, 1988 Fitch Avenue, St. Paul, MN, 55108
Richards Jessie E.: Department of Biomedical and Diagnostic Sciences, College of Veterinary Medicine, University of Tennessee-Knoxville, 2407 River Drive, Knoxville, TN, 37996
Macchietto Marissa G.: Minnesota Supercomputing Institute, University of Minnesota-Twin Cities, 117 Pleasant Street SE, 547 Walter Library, Minneapolis, MN, 55455
Gerhold Richard W.: Department of Biomedical and Diagnostic Sciences, College of Veterinary Medicine, University of Tennessee-Knoxville, 2407 River Drive, Knoxville, TN, 37996
Kania Stephen A.: Department of Biomedical and Diagnostic Sciences, College of Veterinary Medicine, University of Tennessee-Knoxville, 2407 River Drive, Knoxville, TN, 37996
Garbe John R.: Genomics Center, University of Minnesota-Twin Cities, 2231 6th Street SE, Minneapolis, MN, 55455
Fountain-Jones Nicholas M.: School of Natural Sciences, University of Tasmania, Private Bag 37, Hobart, Tasmania, Australia7001
Larsen Peter A.: Department of Veterinary and Biomedical Sciences, College of Veterinary Medicine, University of Minnesota-Twin Cities, Room 239B Veterinary Science Building, 1971 Commonwealth Avenue, Saint Paul, MN, 55108
Wolf Tiffany M.: Department of Veterinary Population Medicine, College of Veterinary Medicine, University of Minnesota-Twin Cities, Room 495 Animal Science/Veterinary Medicine Building, 1988 Fitch Avenue, St. Paul, MN, 55108

DOI: https://doi.org/10.2478/jofnem-2024-0009
Journal volume & issue: Vol. 56, no. 1
pp. 2114 – 2120

Abstract

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Parelaphostrongylus tenuis causes ungulate morbidity and mortality in eastern and central North America, but no reference genome sequence exists to facilitate research. Here, we present a P. tenuis genome assembly and annotation, generated with PacBio and Illumina technologies. The assembly is 491 Mbp, with 7285 scaffolds and 185 kb N50.

Published in Journal of Nematology

ISSN: 0022-300X (Print); 2640-396X (Online)
Publisher: Sciendo
Country of publisher: Poland
LCC subjects: Science: Biology (General)
Website: https://sciendo.com/pl/journal/JOFNEM

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Abstract

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