Nature Communications (Aug 2024)

Physics-informed deep generative learning for quantitative assessment of the retina

  • Emmeline E. Brown,
  • Andrew A. Guy,
  • Natalie A. Holroyd,
  • Paul W. Sweeney,
  • Lucie Gourmet,
  • Hannah Coleman,
  • Claire Walsh,
  • Athina E. Markaki,
  • Rebecca Shipley,
  • Ranjan Rajendram,
  • Simon Walker-Samuel

DOI
https://doi.org/10.1038/s41467-024-50911-y
Journal volume & issue
Vol. 15, no. 1
pp. 1 – 14

Abstract

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Abstract Disruption of retinal vasculature is linked to various diseases, including diabetic retinopathy and macular degeneration, leading to vision loss. We present here a novel algorithmic approach that generates highly realistic digital models of human retinal blood vessels, based on established biophysical principles, including fully-connected arterial and venous trees with a single inlet and outlet. This approach, using physics-informed generative adversarial networks (PI-GAN), enables the segmentation and reconstruction of blood vessel networks with no human input and which out-performs human labelling. Segmentation of DRIVE and STARE retina photograph datasets provided near state-of-the-art vessel segmentation, with training on only a small (n = 100) simulated dataset. Our findings highlight the potential of PI-GAN for accurate retinal vasculature characterization, with implications for improving early disease detection, monitoring disease progression, and improving patient care.