Genome Biology (Aug 2018)
Linking the International Wheat Genome Sequencing Consortium bread wheat reference genome sequence to wheat genetic and phenomic data
- Michael Alaux,
- Jane Rogers,
- Thomas Letellier,
- Raphaël Flores,
- Françoise Alfama,
- Cyril Pommier,
- Nacer Mohellibi,
- Sophie Durand,
- Erik Kimmel,
- Célia Michotey,
- Claire Guerche,
- Mikaël Loaec,
- Mathilde Lainé,
- Delphine Steinbach,
- Frédéric Choulet,
- Hélène Rimbert,
- Philippe Leroy,
- Nicolas Guilhot,
- Jérôme Salse,
- Catherine Feuillet,
- International Wheat Genome Sequencing Consortium,
- Etienne Paux,
- Kellye Eversole,
- Anne-Françoise Adam-Blondon,
- Hadi Quesneville
Affiliations
- Michael Alaux
- URGI, INRA, Université Paris-Saclay
- Jane Rogers
- International Wheat Genome Sequencing Consortium (IWGSC)
- Thomas Letellier
- URGI, INRA, Université Paris-Saclay
- Raphaël Flores
- URGI, INRA, Université Paris-Saclay
- Françoise Alfama
- URGI, INRA, Université Paris-Saclay
- Cyril Pommier
- URGI, INRA, Université Paris-Saclay
- Nacer Mohellibi
- URGI, INRA, Université Paris-Saclay
- Sophie Durand
- URGI, INRA, Université Paris-Saclay
- Erik Kimmel
- URGI, INRA, Université Paris-Saclay
- Célia Michotey
- URGI, INRA, Université Paris-Saclay
- Claire Guerche
- URGI, INRA, Université Paris-Saclay
- Mikaël Loaec
- URGI, INRA, Université Paris-Saclay
- Mathilde Lainé
- URGI, INRA, Université Paris-Saclay
- Delphine Steinbach
- URGI, INRA, Université Paris-Saclay
- Frédéric Choulet
- GDEC, INRA, Université Clermont Auvergne
- Hélène Rimbert
- GDEC, INRA, Université Clermont Auvergne
- Philippe Leroy
- GDEC, INRA, Université Clermont Auvergne
- Nicolas Guilhot
- GDEC, INRA, Université Clermont Auvergne
- Jérôme Salse
- GDEC, INRA, Université Clermont Auvergne
- Catherine Feuillet
- GDEC, INRA, Université Clermont Auvergne
- International Wheat Genome Sequencing Consortium
- International Wheat Genome Sequencing Consortium (IWGSC)
- Etienne Paux
- GDEC, INRA, Université Clermont Auvergne
- Kellye Eversole
- International Wheat Genome Sequencing Consortium (IWGSC)
- Anne-Françoise Adam-Blondon
- URGI, INRA, Université Paris-Saclay
- Hadi Quesneville
- URGI, INRA, Université Paris-Saclay
- DOI
- https://doi.org/10.1186/s13059-018-1491-4
- Journal volume & issue
-
Vol. 19,
no. 1
pp. 1 – 10
Abstract
Abstract The Wheat@URGI portal has been developed to provide the international community of researchers and breeders with access to the bread wheat reference genome sequence produced by the International Wheat Genome Sequencing Consortium. Genome browsers, BLAST, and InterMine tools have been established for in-depth exploration of the genome sequence together with additional linked datasets including physical maps, sequence variations, gene expression, and genetic and phenomic data from other international collaborative projects already stored in the GnpIS information system. The portal provides enhanced search and browser features that will facilitate the deployment of the latest genomics resources in wheat improvement.
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