npj Precision Oncology (Dec 2022)

Comprehensive pan-cancer genomic landscape of KRAS altered cancers and real-world outcomes in solid tumors

  • Jessica K. Lee,
  • Smruthy Sivakumar,
  • Alexa B. Schrock,
  • Russell Madison,
  • David Fabrizio,
  • Ole Gjoerup,
  • Jeffrey S. Ross,
  • Garrett M. Frampton,
  • Pavel Napalkov,
  • Meagan Montesion,
  • Jennifer L. Schutzman,
  • Xin Ye,
  • Priti S. Hegde,
  • Misako Nagasaka,
  • Geoffrey R. Oxnard,
  • Ethan S. Sokol,
  • Sai-Hong Ignatius Ou,
  • Zhen Shi

DOI
https://doi.org/10.1038/s41698-022-00334-z
Journal volume & issue
Vol. 6, no. 1
pp. 1 – 14

Abstract

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Abstract Recent clinical development of KRAS inhibitors has heightened interest in the genomic landscape of KRAS-altered cancers. We performed a pan-cancer analysis of KRAS-altered samples from 426,706 adult patients with solid or hematologic malignancies using comprehensive genomic profiling; additional analyses included 62,369 liquid biopsy and 7241 pediatric samples. 23% of adult pan-cancer samples had KRAS alterations; 88% were mutations, most commonly G12D/G12V/G12C/G13D/G12R, and prevalence was similar in liquid biopsies. Co-alteration landscapes were largely similar across KRAS mutations but distinct from KRAS wild-type, though differences were observed in some tumor types for tumor mutational burden, PD-L1 expression, microsatellite instability, and other mutational signatures. Prognosis of KRAS-mutant versus other genomic cohorts of lung, pancreatic, and colorectal cancer were assessed using a real-world clinicogenomic database. As specific KRAS inhibitors and combination therapeutic strategies are being developed, genomic profiling to understand co-alterations and other biomarkers that may modulate response to targeted or immunotherapies will be imperative.