Nature Communications (Oct 2020)

Predicting cell-to-cell communication networks using NATMI

  • Rui Hou,
  • Elena Denisenko,
  • Huan Ting Ong,
  • Jordan A. Ramilowski,
  • Alistair R. R. Forrest

DOI
https://doi.org/10.1038/s41467-020-18873-z
Journal volume & issue
Vol. 11, no. 1
pp. 1 – 11

Abstract

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Single cell expression data allows for inferring cell-cell communication between cells expressing ligands and those expressing their cognate receptors. Here the authors present an updated and curated database of ligand-receptor pairs and a Python-based toolkit to construct and analyse communication networks from single cell and bulk expression data.