Genome-wide analysis of the bZIP gene family in Cinnamomum camphora ('Gantong 1') reveals the putative function in anthocyanin biosynthesis

Xiuqi Li; Xue Gong; Hanbin Lin; Shupei Rao; Le Shen; Caihui Chen; Zhaoxiang Wu; Huihu Li; Qiaoli Liu; Yongda Zhong

Heliyon (Jul 2024)

Genome-wide analysis of the bZIP gene family in Cinnamomum camphora ('Gantong 1') reveals the putative function in anthocyanin biosynthesis

Xiuqi Li,
Xue Gong,
Hanbin Lin,
Shupei Rao,
Le Shen,
Caihui Chen,
Zhaoxiang Wu,
Huihu Li,
Qiaoli Liu,
Yongda Zhong

Affiliations

Xiuqi Li: College of Forestry, Jiangxi Agricultural University, Nanchang, 330045, China; Jiangxi Provincial Key Laboratory of Improved Variety Breeding and Efficient Utilization of Native Tree Species, Institute of Biological Resources, Jiangxi Academy of Sciences, Nanchang, 330096, China
Xue Gong: Jiangxi Provincial Key Laboratory of Improved Variety Breeding and Efficient Utilization of Native Tree Species, Institute of Biological Resources, Jiangxi Academy of Sciences, Nanchang, 330096, China
Hanbin Lin: College of Forestry, Jiangxi Agricultural University, Nanchang, 330045, China; Jiangxi Provincial Key Laboratory of Improved Variety Breeding and Efficient Utilization of Native Tree Species, Institute of Biological Resources, Jiangxi Academy of Sciences, Nanchang, 330096, China
Shupei Rao: Jiangxi Provincial Key Laboratory of Improved Variety Breeding and Efficient Utilization of Native Tree Species, Institute of Biological Resources, Jiangxi Academy of Sciences, Nanchang, 330096, China
Le Shen: Jiangxi Provincial Key Laboratory of Improved Variety Breeding and Efficient Utilization of Native Tree Species, Institute of Biological Resources, Jiangxi Academy of Sciences, Nanchang, 330096, China
Caihui Chen: Jiangxi Provincial Key Laboratory of Improved Variety Breeding and Efficient Utilization of Native Tree Species, Institute of Biological Resources, Jiangxi Academy of Sciences, Nanchang, 330096, China
Zhaoxiang Wu: Jiangxi Provincial Key Laboratory of Improved Variety Breeding and Efficient Utilization of Native Tree Species, Institute of Biological Resources, Jiangxi Academy of Sciences, Nanchang, 330096, China
Huihu Li: Jiangxi Provincial Key Laboratory of Improved Variety Breeding and Efficient Utilization of Native Tree Species, Institute of Biological Resources, Jiangxi Academy of Sciences, Nanchang, 330096, China
Qiaoli Liu: Jiangxi Provincial Key Laboratory of Improved Variety Breeding and Efficient Utilization of Native Tree Species, Institute of Biological Resources, Jiangxi Academy of Sciences, Nanchang, 330096, China
Yongda Zhong: College of Forestry, Jiangxi Agricultural University, Nanchang, 330045, China; Jiangxi Provincial Key Laboratory of Improved Variety Breeding and Efficient Utilization of Native Tree Species, Institute of Biological Resources, Jiangxi Academy of Sciences, Nanchang, 330096, China; Corresponding author. No. 7777, Changdong Avenue, Gaoxin District, Nanchang, China.

Journal volume & issue: Vol. 10, no. 14
p. e34311

Abstract

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Basic leucine zipper (bZIP) transcription factors (TFs) regulate plant development, growth, and secondary metabolism. The formation of red bark of new ornamental cultivar 'Gantong 1' is regulated mainly by anthocyanin anabolism. However, it is unclear whether and which bZIP TFs are involved in this process. We identified 89 genes encoding CcbZIP TFs in Cinnamomum camphora genome that could be divided into 14 subfamilies with similar gene structures and conserved motifs. CcbZIP38 and CcbZIP57 were highly conserved compared to HY5 in Arabidopsis thaliana and they were highly expressed in the bark and leaves of 'Gantong 1' at different stages. The target gene enrichment analysis showed that indicating indirect involvement of CcbZIP38 and CcbZIP57 in the regulation of anthocyanin synthesis. Our study contributes to understanding the molecular mechanism of anthocyanin synthesis regulation by CcbZIP TFs and provides a theoretical basis for genetic improvement of ornamental traits in C. camphora.

Published in Heliyon

ISSN: 2405-8440 (Online)
Publisher: Elsevier
Country of publisher: United Kingdom
LCC subjects: Science: Science (General); Social Sciences: Social sciences (General)
Website: https://www.cell.com/heliyon/home

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