Nature Communications (Mar 2022)

Massively parallel reporter perturbation assays uncover temporal regulatory architecture during neural differentiation

  • Anat Kreimer,
  • Tal Ashuach,
  • Fumitaka Inoue,
  • Alex Khodaverdian,
  • Chengyu Deng,
  • Nir Yosef,
  • Nadav Ahituv

DOI
https://doi.org/10.1038/s41467-022-28659-0
Journal volume & issue
Vol. 13, no. 1
pp. 1 – 15

Abstract

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How gene regulatory elements regulate gene expression during cellular differentiation remains largely unknown. Here the authors use perturbation-based massively parallel reporter assays at early time points of neural differentiation to systematically characterize how regulatory elements and motifs within them guide different transcriptional patterns.