The complete chloroplast genome sequence of Distylium macrophyllum (Hamamelidaceae)

Shuifei Chen; Yao Li; Lu Wang; Lei Xie; Xiaomin Ge; Xu Zhou; Yaping Hu; Wenwen Zhang; Yanming Fang; Hui Ding

doi:10.1080/23802359.2019.1703606

Mitochondrial DNA. Part B. Resources (Jan 2020)

The complete chloroplast genome sequence of Distylium macrophyllum (Hamamelidaceae)

Shuifei Chen,
Yao Li,
Lu Wang,
Lei Xie,
Xiaomin Ge,
Xu Zhou,
Yaping Hu,
Wenwen Zhang,
Yanming Fang,
Hui Ding

Affiliations

Shuifei Chen: Research Center for Nature Conservation and Biodiversity, State Environmental Protection Scientific Observation and Research Station for Ecology and Environment of Wuyi Mountains, State Environmental Protection Key Laboratory on Biosafety, Nanjing Institute of Environmental Sciences, Ministry of Ecology and Environment
Yao Li: Co-Innovation Center for Sustainable Forestry in Southern China, College of Biology and the Environment, Key Laboratory of State Forestry and Grassland Administration on Subtropical Forest Biodiversity Conservation, Nanjing Forestry University
Lu Wang: Co-Innovation Center for Sustainable Forestry in Southern China, College of Biology and the Environment, Key Laboratory of State Forestry and Grassland Administration on Subtropical Forest Biodiversity Conservation, Nanjing Forestry University
Lei Xie: Co-Innovation Center for Sustainable Forestry in Southern China, College of Biology and the Environment, Key Laboratory of State Forestry and Grassland Administration on Subtropical Forest Biodiversity Conservation, Nanjing Forestry University
Xiaomin Ge: Research Center for Nature Conservation and Biodiversity, State Environmental Protection Scientific Observation and Research Station for Ecology and Environment of Wuyi Mountains, State Environmental Protection Key Laboratory on Biosafety, Nanjing Institute of Environmental Sciences, Ministry of Ecology and Environment
Xu Zhou: Research Center for Nature Conservation and Biodiversity, State Environmental Protection Scientific Observation and Research Station for Ecology and Environment of Wuyi Mountains, State Environmental Protection Key Laboratory on Biosafety, Nanjing Institute of Environmental Sciences, Ministry of Ecology and Environment
Yaping Hu: Research Center for Nature Conservation and Biodiversity, State Environmental Protection Scientific Observation and Research Station for Ecology and Environment of Wuyi Mountains, State Environmental Protection Key Laboratory on Biosafety, Nanjing Institute of Environmental Sciences, Ministry of Ecology and Environment
Wenwen Zhang: Research Center for Nature Conservation and Biodiversity, State Environmental Protection Scientific Observation and Research Station for Ecology and Environment of Wuyi Mountains, State Environmental Protection Key Laboratory on Biosafety, Nanjing Institute of Environmental Sciences, Ministry of Ecology and Environment
Yanming Fang: Co-Innovation Center for Sustainable Forestry in Southern China, College of Biology and the Environment, Key Laboratory of State Forestry and Grassland Administration on Subtropical Forest Biodiversity Conservation, Nanjing Forestry University
Hui Ding: Research Center for Nature Conservation and Biodiversity, State Environmental Protection Scientific Observation and Research Station for Ecology and Environment of Wuyi Mountains, State Environmental Protection Key Laboratory on Biosafety, Nanjing Institute of Environmental Sciences, Ministry of Ecology and Environment

DOI: https://doi.org/10.1080/23802359.2019.1703606
Journal volume & issue: Vol. 5, no. 1
pp. 701 – 702

Abstract

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Distylium macrophyllum H.T.Chang is a critically endangered tree species endemic to southern China. In this study, we assembled and characterized the plastome of D. macrophyllum using Illumina paired-end data. The circular genome is 159,089 bp in size, consisting of two copies of inverted repeat (IR) regions of 26,235 bp, one large single-copy (LSC) region of 87,822 bp, and one small single-copy (SSC) region of 18,797 bp. It encodes a total of 114 unique genes, including 80 protein-coding genes, 30 tRNA genes, and four rRNA genes. Phylogenetic analysis based on 13 cp genome sequences indicated that D. macrophyllum was sister to the clade of D. tsiangii and Parrotia subaequalis.

Published in Mitochondrial DNA. Part B. Resources

ISSN: 2380-2359 (Online)
Publisher: Taylor & Francis Group
Country of publisher: United Kingdom
LCC subjects: Science: Biology (General): Genetics
Website: https://www.tandfonline.com/journals/tmdn20

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